Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1aQ9D132 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Upk1aQ9D132 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk1aQ9D132 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Upk1aQ9D132 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Upk1aQ9D132 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk1aQ9D132 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk1aQ9D132 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk1aQ9D132 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk1aQ9D132 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Upk1aQ9D132 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.51■□□□□ 0.39
Upk1aQ9D132 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.51■□□□□ 0.39
Upk1aQ9D132 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk1aQ9D132 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1aQ9D132 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1aQ9D132 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1aQ9D132 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk1aQ9D132 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Upk1aQ9D132 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.5■□□□□ 0.39
Upk1aQ9D132 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk1aQ9D132 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.48■□□□□ 0.39
Upk1aQ9D132 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Gm13241-201ENSMUST00000094493 780 ntBASIC17.48■□□□□ 0.39
Upk1aQ9D132 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk1aQ9D132 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.47■□□□□ 0.39
Upk1aQ9D132 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.47■□□□□ 0.39
Upk1aQ9D132 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms