Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.34■□□□□ 0.05
Ssbp3Q9D032 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.34■□□□□ 0.05
Ssbp3Q9D032 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssbp3Q9D032 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ssbp3Q9D032 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ssbp3Q9D032 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.33■□□□□ 0.05
Ssbp3Q9D032 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssbp3Q9D032 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssbp3Q9D032 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssbp3Q9D032 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssbp3Q9D032 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssbp3Q9D032 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssbp3Q9D032 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssbp3Q9D032 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.33■□□□□ 0.04
Ssbp3Q9D032 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssbp3Q9D032 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssbp3Q9D032 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ssbp3Q9D032 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssbp3Q9D032 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ssbp3Q9D032 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssbp3Q9D032 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Gm27011-201ENSMUST00000182352 972 ntBASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssbp3Q9D032 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Gm26524-201ENSMUST00000192339 390 ntBASIC15.3■□□□□ 0.04
Ssbp3Q9D032 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.3■□□□□ 0.04
Ssbp3Q9D032 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Rab3c-203ENSMUST00000224180 967 ntBASIC15.3■□□□□ 0.04
Ssbp3Q9D032 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Golph3-205ENSMUST00000228671 2842 ntBASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ssbp3Q9D032 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssbp3Q9D032 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms