Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim13Q9CYB0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim13Q9CYB0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim13Q9CYB0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim13Q9CYB0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim13Q9CYB0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim13Q9CYB0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim13Q9CYB0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim13Q9CYB0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim13Q9CYB0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim13Q9CYB0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim13Q9CYB0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim13Q9CYB0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Golgb1-201ENSMUST00000023534 498 ntBASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim13Q9CYB0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Trim13Q9CYB0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17■□□□□ 0.31
Trim13Q9CYB0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms