Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.56■□□□□ 0.56
Retreg3Q9CQV4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.56■□□□□ 0.56
Retreg3Q9CQV4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg3Q9CQV4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.56■□□□□ 0.56
Retreg3Q9CQV4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg3Q9CQV4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retreg3Q9CQV4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg3Q9CQV4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg3Q9CQV4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retreg3Q9CQV4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg3Q9CQV4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Gm13148-201ENSMUST00000118892 745 ntBASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Mir5133-201ENSMUST00000174955 77 ntBASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg3Q9CQV4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg3Q9CQV4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retreg3Q9CQV4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retreg3Q9CQV4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms