Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpa3Q9CQ71 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpa3Q9CQ71 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpa3Q9CQ71 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rpa3Q9CQ71 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa3Q9CQ71 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa3Q9CQ71 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Gm6365-201ENSMUST00000054711 744 ntBASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa3Q9CQ71 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa3Q9CQ71 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms