Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl54Q9CPW3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl54Q9CPW3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Mrpl54Q9CPW3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl54Q9CPW3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl54Q9CPW3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl54Q9CPW3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.36■□□□□ 0.21
Mrpl54Q9CPW3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mrpl54Q9CPW3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.35■□□□□ 0.21
Mrpl54Q9CPW3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mrpl54Q9CPW3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mrpl54Q9CPW3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms