Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm11927-201ENSMUST00000118472 759 ntBASIC19.02■□□□□ 0.64
Cdh23Q99PF4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdh23Q99PF4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh23Q99PF4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh23Q99PF4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Gm5867-201ENSMUST00000063197 592 ntBASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh23Q99PF4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh23Q99PF4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh23Q99PF4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh23Q99PF4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh23Q99PF4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cdh23Q99PF4 Gm17661-201ENSMUST00000170317 270 ntBASIC19■□□□□ 0.63
Cdh23Q99PF4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh23Q99PF4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19■□□□□ 0.63
Cdh23Q99PF4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cdh23Q99PF4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdh23Q99PF4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.99■□□□□ 0.63
Cdh23Q99PF4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh23Q99PF4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh23Q99PF4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Gm15375-201ENSMUST00000119510 849 ntBASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh23Q99PF4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Flg-201ENSMUST00000050758 1488 ntBASIC18.95■□□□□ 0.62
Cdh23Q99PF4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh23Q99PF4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh23Q99PF4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh23Q99PF4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh23Q99PF4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh23Q99PF4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh23Q99PF4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh23Q99PF4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh23Q99PF4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh23Q99PF4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh23Q99PF4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh23Q99PF4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh23Q99PF4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cdh23Q99PF4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh23Q99PF4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.93■□□□□ 0.62
Cdh23Q99PF4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh23Q99PF4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh23Q99PF4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cdh23Q99PF4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms