Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.13■□□□□ 0.17
Scrt1Q99M85 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Dio3-201ENSMUST00000097228 1449 ntBASIC16.13■□□□□ 0.17
Scrt1Q99M85 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Gm37055-201ENSMUST00000191866 133 ntBASIC16.13■□□□□ 0.17
Scrt1Q99M85 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scrt1Q99M85 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.12■□□□□ 0.17
Scrt1Q99M85 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scrt1Q99M85 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.11■□□□□ 0.17
Scrt1Q99M85 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.11■□□□□ 0.17
Scrt1Q99M85 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Gm11249-201ENSMUST00000117071 859 ntBASIC16.11■□□□□ 0.17
Scrt1Q99M85 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Gm9987-201ENSMUST00000069768 567 ntBASIC16.11■□□□□ 0.17
Scrt1Q99M85 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scrt1Q99M85 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Scrt1Q99M85 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scrt1Q99M85 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms