Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clp1Q99LI9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clp1Q99LI9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.58■□□□□ 0.73
Clp1Q99LI9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clp1Q99LI9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
Clp1Q99LI9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clp1Q99LI9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clp1Q99LI9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clp1Q99LI9 Gm13559-201ENSMUST00000120476 863 ntBASIC19.58■□□□□ 0.72
Clp1Q99LI9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clp1Q99LI9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clp1Q99LI9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clp1Q99LI9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Clp1Q99LI9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clp1Q99LI9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clp1Q99LI9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Gm38285-201ENSMUST00000192928 922 ntBASIC19.57■□□□□ 0.72
Clp1Q99LI9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.57■□□□□ 0.72
Clp1Q99LI9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clp1Q99LI9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Clp1Q99LI9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clp1Q99LI9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clp1Q99LI9 Gm42545-201ENSMUST00000202755 922 ntBASIC19.56■□□□□ 0.72
Clp1Q99LI9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.56■□□□□ 0.72
Clp1Q99LI9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clp1Q99LI9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clp1Q99LI9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clp1Q99LI9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clp1Q99LI9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clp1Q99LI9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Gm37292-201ENSMUST00000192062 758 ntBASIC19.55■□□□□ 0.72
Clp1Q99LI9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Clp1Q99LI9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.55■□□□□ 0.72
Clp1Q99LI9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clp1Q99LI9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clp1Q99LI9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.54■□□□□ 0.72
Clp1Q99LI9 Gm11539-201ENSMUST00000119837 557 ntBASIC19.54■□□□□ 0.72
Clp1Q99LI9 Gm13436-201ENSMUST00000120418 567 ntBASIC19.54■□□□□ 0.72
Clp1Q99LI9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clp1Q99LI9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clp1Q99LI9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Clp1Q99LI9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Clp1Q99LI9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.53■□□□□ 0.72
Clp1Q99LI9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clp1Q99LI9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clp1Q99LI9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clp1Q99LI9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clp1Q99LI9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Clp1Q99LI9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clp1Q99LI9 Gm3375-201ENSMUST00000203929 796 ntBASIC19.53■□□□□ 0.72
Clp1Q99LI9 Timm23-208ENSMUST00000226683 750 ntBASIC19.53■□□□□ 0.72
Clp1Q99LI9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Clp1Q99LI9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clp1Q99LI9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.52■□□□□ 0.72
Clp1Q99LI9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Clp1Q99LI9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clp1Q99LI9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.51■□□□□ 0.71
Clp1Q99LI9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Clp1Q99LI9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms