Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Gm27275-201ENSMUST00000184318 272 ntBASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prdm9Q96EQ9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prdm9Q96EQ9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Gm13168-201ENSMUST00000121771 632 ntBASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prdm9Q96EQ9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prdm9Q96EQ9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prdm9Q96EQ9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prdm9Q96EQ9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prdm9Q96EQ9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prdm9Q96EQ9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prdm9Q96EQ9 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.13■□□□□ 0.49
Prdm9Q96EQ9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prdm9Q96EQ9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Gm2399-201ENSMUST00000104944 225 ntBASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prdm9Q96EQ9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prdm9Q96EQ9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms