Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1aQ921W0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp1aQ921W0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp1aQ921W0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp1aQ921W0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp1aQ921W0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chmp1aQ921W0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp1aQ921W0 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp1aQ921W0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Gm15546-201ENSMUST00000122095 826 ntBASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Gm9959-201ENSMUST00000068277 390 ntBASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp1aQ921W0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Gm5812-201ENSMUST00000061073 957 ntBASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chmp1aQ921W0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp1aQ921W0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms