Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Pcdha1Q91Y21 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Pcdha1Q91Y21 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.27■□□□□ 0.67
Pcdha1Q91Y21 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha1Q91Y21 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Trmt13-210ENSMUST00000198454 880 ntBASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha1Q91Y21 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Gm13168-201ENSMUST00000121771 632 ntBASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdha1Q91Y21 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.23■□□□□ 0.67
Pcdha1Q91Y21 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.22■□□□□ 0.67
Pcdha1Q91Y21 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha1Q91Y21 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha1Q91Y21 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha1Q91Y21 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha1Q91Y21 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdha1Q91Y21 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdha1Q91Y21 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms