Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha11Q91Y19 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha11Q91Y19 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha11Q91Y19 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha11Q91Y19 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Gm27011-201ENSMUST00000182352 972 ntBASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha11Q91Y19 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha11Q91Y19 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha11Q91Y19 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha11Q91Y19 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha11Q91Y19 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Gm12527-201ENSMUST00000117967 564 ntBASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms