Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb22Q91XZ8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb22Q91XZ8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb22Q91XZ8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb22Q91XZ8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb22Q91XZ8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Gm10602-201ENSMUST00000098239 609 ntBASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb22Q91XZ8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb22Q91XZ8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb22Q91XZ8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb22Q91XZ8 Gm22325-201ENSMUST00000158904 308 ntBASIC21.58■■□□□ 1.05
Pcdhb22Q91XZ8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb22Q91XZ8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb22Q91XZ8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb22Q91XZ8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb22Q91XZ8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb22Q91XZ8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb22Q91XZ8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb22Q91XZ8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb22Q91XZ8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb22Q91XZ8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhb22Q91XZ8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Gm26524-201ENSMUST00000192339 390 ntBASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.55■■□□□ 1.04
Pcdhb22Q91XZ8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb22Q91XZ8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb22Q91XZ8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb22Q91XZ8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb22Q91XZ8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdhb22Q91XZ8 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.51■■□□□ 1.03
Pcdhb22Q91XZ8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb22Q91XZ8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb22Q91XZ8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms