Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Gm38205-201ENSMUST00000192243 258 ntBASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb4Q91XZ6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb4Q91XZ6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb4Q91XZ6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb4Q91XZ6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb4Q91XZ6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhb4Q91XZ6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb4Q91XZ6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb4Q91XZ6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb4Q91XZ6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb4Q91XZ6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms