Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhga11Q91XY8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhga11Q91XY8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga11Q91XY8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.8■□□□□ 0.44
Pcdhga11Q91XY8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga11Q91XY8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga11Q91XY8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga11Q91XY8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Gm10493-201ENSMUST00000097270 612 ntBASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga11Q91XY8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga11Q91XY8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga11Q91XY8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga11Q91XY8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga11Q91XY8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga11Q91XY8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga11Q91XY8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga11Q91XY8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhga11Q91XY8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhga11Q91XY8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga11Q91XY8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms