Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga9Q91XX9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhga9Q91XX9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga9Q91XX9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga9Q91XX9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga9Q91XX9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga9Q91XX9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga9Q91XX9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga9Q91XX9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga9Q91XX9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga9Q91XX9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga9Q91XX9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga9Q91XX9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms