Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc3Q91XX1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhgc3Q91XX1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Pcdhgc3Q91XX1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Gm9847-201ENSMUST00000052528 599 ntBASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgc3Q91XX1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc3Q91XX1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgc3Q91XX1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms