Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdhb11Q91UZ8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdhb11Q91UZ8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb11Q91UZ8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb11Q91UZ8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb11Q91UZ8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb11Q91UZ8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb11Q91UZ8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdhb11Q91UZ8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Gm6365-201ENSMUST00000054711 744 ntBASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb11Q91UZ8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb11Q91UZ8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb11Q91UZ8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb11Q91UZ8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.89■□□□□ 0.62
Pcdhb11Q91UZ8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.89■□□□□ 0.62
Pcdhb11Q91UZ8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb11Q91UZ8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Gm7290-201ENSMUST00000104990 617 ntBASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Gm12918-201ENSMUST00000120234 636 ntBASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Gm15710-201ENSMUST00000121821 636 ntBASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Gm5075-201ENSMUST00000196916 622 ntBASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb11Q91UZ8 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.88■□□□□ 0.61
Pcdhb11Q91UZ8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms