Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rprd1aQ8VDS4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rprd1aQ8VDS4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rprd1aQ8VDS4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.93■□□□□ 0.62
Rprd1aQ8VDS4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Gm26524-201ENSMUST00000192339 390 ntBASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Gm4968-201ENSMUST00000071458 858 ntBASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rprd1aQ8VDS4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rprd1aQ8VDS4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Gm12441-201ENSMUST00000121806 588 ntBASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Rab3c-203ENSMUST00000224180 967 ntBASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 BC021767-201ENSMUST00000126387 1716 ntBASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms