Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Gm9988-201ENSMUST00000069786 435 ntBASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps39Q8R5L3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps39Q8R5L3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps39Q8R5L3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps39Q8R5L3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps39Q8R5L3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms