Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Gm10849-201ENSMUST00000100397 618 ntBASIC17.47■□□□□ 0.39
Ubqln1Q8R317 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln1Q8R317 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ubqln1Q8R317 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ubqln1Q8R317 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.46■□□□□ 0.38
Ubqln1Q8R317 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ubqln1Q8R317 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
Ubqln1Q8R317 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln1Q8R317 Golph3-205ENSMUST00000228671 2842 ntBASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Gm26571-201ENSMUST00000181399 666 ntBASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Gm6420-201ENSMUST00000193885 723 ntBASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Gm42569-201ENSMUST00000200539 472 ntBASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln1Q8R317 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Ubqln1Q8R317 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln1Q8R317 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms