Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Rps24-207ENSMUST00000224568 714 ntBASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Nudcd3Q8R1N4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Gm7860-201ENSMUST00000121190 879 ntBASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Nudcd3Q8R1N4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nudcd3Q8R1N4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nudcd3Q8R1N4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nudcd3Q8R1N4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nudcd3Q8R1N4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms