Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tm6sf2Q8R1J1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf2Q8R1J1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf2Q8R1J1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tm6sf2Q8R1J1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tm6sf2Q8R1J1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tm6sf2Q8R1J1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tm6sf2Q8R1J1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tm6sf2Q8R1J1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tm6sf2Q8R1J1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tm6sf2Q8R1J1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tm6sf2Q8R1J1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms