Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim2Q8R1G6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim2Q8R1G6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim2Q8R1G6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim2Q8R1G6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Gm13238-201ENSMUST00000117655 780 ntBASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pdlim2Q8R1G6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim2Q8R1G6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim2Q8R1G6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim2Q8R1G6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim2Q8R1G6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim2Q8R1G6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim2Q8R1G6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Pdlim2Q8R1G6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pdlim2Q8R1G6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.26■□□□□ 0.99
Pdlim2Q8R1G6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim2Q8R1G6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Tgds-204ENSMUST00000228543 1594 ntBASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pdlim2Q8R1G6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim2Q8R1G6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim2Q8R1G6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim2Q8R1G6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Pdlim2Q8R1G6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim2Q8R1G6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms