Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4rl1Q8K0S5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.77■□□□□ 0.6
Rtn4rl1Q8K0S5 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.77■□□□□ 0.6
Rtn4rl1Q8K0S5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4rl1Q8K0S5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4rl1Q8K0S5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4rl1Q8K0S5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn4rl1Q8K0S5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Gm37292-201ENSMUST00000192062 758 ntBASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4rl1Q8K0S5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Gm30025-201ENSMUST00000218555 728 ntBASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Rtn4rl1Q8K0S5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4rl1Q8K0S5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4rl1Q8K0S5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Gm13559-201ENSMUST00000120476 863 ntBASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtn4rl1Q8K0S5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.71■□□□□ 0.59
Rtn4rl1Q8K0S5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms