Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd3Q8CIK8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.33■□□□□ 0.37
Rfwd3Q8CIK8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd3Q8CIK8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Rfwd3Q8CIK8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd3Q8CIK8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd3Q8CIK8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.33■□□□□ 0.37
Rfwd3Q8CIK8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.33■□□□□ 0.37
Rfwd3Q8CIK8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd3Q8CIK8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd3Q8CIK8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Nespas-201ENSMUST00000143738 1083 ntBASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd3Q8CIK8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd3Q8CIK8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd3Q8CIK8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd3Q8CIK8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms