Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clip4Q8CI96 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip4Q8CI96 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip4Q8CI96 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clip4Q8CI96 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip4Q8CI96 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Clip4Q8CI96 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.54■□□□□ 0.56
Clip4Q8CI96 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Clip4Q8CI96 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.54■□□□□ 0.56
Clip4Q8CI96 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.54■□□□□ 0.56
Clip4Q8CI96 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.54■□□□□ 0.56
Clip4Q8CI96 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip4Q8CI96 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Clip4Q8CI96 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Gm38205-201ENSMUST00000192243 258 ntBASIC18.53■□□□□ 0.56
Clip4Q8CI96 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.53■□□□□ 0.56
Clip4Q8CI96 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip4Q8CI96 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip4Q8CI96 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clip4Q8CI96 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clip4Q8CI96 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clip4Q8CI96 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.5■□□□□ 0.55
Clip4Q8CI96 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Gm13146-201ENSMUST00000118508 780 ntBASIC18.5■□□□□ 0.55
Clip4Q8CI96 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Gm37179-201ENSMUST00000194862 823 ntBASIC18.5■□□□□ 0.55
Clip4Q8CI96 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.5■□□□□ 0.55
Clip4Q8CI96 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clip4Q8CI96 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.49■□□□□ 0.55
Clip4Q8CI96 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.49■□□□□ 0.55
Clip4Q8CI96 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.49■□□□□ 0.55
Clip4Q8CI96 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Clip4Q8CI96 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Clip4Q8CI96 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip4Q8CI96 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms