Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Gm10493-201ENSMUST00000097270 612 ntBASIC21.14■□□□□ 0.97
Smc2Q8CG48 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc2Q8CG48 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smc2Q8CG48 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smc2Q8CG48 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc2Q8CG48 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.13■□□□□ 0.97
Smc2Q8CG48 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc2Q8CG48 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc2Q8CG48 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smc2Q8CG48 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.13■□□□□ 0.97
Smc2Q8CG48 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc2Q8CG48 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Gm13534-201ENSMUST00000121169 513 ntBASIC21.12■□□□□ 0.97
Smc2Q8CG48 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.12■□□□□ 0.97
Smc2Q8CG48 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc2Q8CG48 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc2Q8CG48 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc2Q8CG48 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.09■□□□□ 0.97
Smc2Q8CG48 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc2Q8CG48 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Smc2Q8CG48 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smc2Q8CG48 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.08■□□□□ 0.97
Smc2Q8CG48 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.08■□□□□ 0.97
Smc2Q8CG48 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.08■□□□□ 0.97
Smc2Q8CG48 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc2Q8CG48 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc2Q8CG48 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc2Q8CG48 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc2Q8CG48 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Smc2Q8CG48 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc2Q8CG48 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc2Q8CG48 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc2Q8CG48 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc2Q8CG48 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms