Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.76■■□□□ 1.23
Smc4Q8CG47 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc4Q8CG47 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smc4Q8CG47 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smc4Q8CG47 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smc4Q8CG47 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smc4Q8CG47 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smc4Q8CG47 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
Smc4Q8CG47 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smc4Q8CG47 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Flg-201ENSMUST00000050758 1488 ntBASIC22.74■■□□□ 1.23
Smc4Q8CG47 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc4Q8CG47 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Smc4Q8CG47 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Smc4Q8CG47 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc4Q8CG47 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc4Q8CG47 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Smc4Q8CG47 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.73■■□□□ 1.23
Smc4Q8CG47 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.73■■□□□ 1.23
Smc4Q8CG47 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc4Q8CG47 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc4Q8CG47 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc4Q8CG47 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.72■■□□□ 1.23
Smc4Q8CG47 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Smc4Q8CG47 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
Smc4Q8CG47 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc4Q8CG47 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc4Q8CG47 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Gm11249-201ENSMUST00000117071 859 ntBASIC22.71■■□□□ 1.23
Smc4Q8CG47 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc4Q8CG47 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Smc4Q8CG47 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Smc4Q8CG47 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Gm18666-201ENSMUST00000190039 958 ntBASIC22.7■■□□□ 1.22
Smc4Q8CG47 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.7■■□□□ 1.22
Smc4Q8CG47 Gm10812-201ENSMUST00000099864 546 ntBASIC22.7■■□□□ 1.22
Smc4Q8CG47 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc4Q8CG47 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Smc4Q8CG47 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Gm5643-201ENSMUST00000117081 966 ntBASIC22.69■■□□□ 1.22
Smc4Q8CG47 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc4Q8CG47 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc4Q8CG47 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Smc4Q8CG47 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.68■■□□□ 1.22
Smc4Q8CG47 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Smc4Q8CG47 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Smc4Q8CG47 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
Smc4Q8CG47 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.68■■□□□ 1.22
Smc4Q8CG47 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms