Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm5408-201ENSMUST00000197998 747 ntBASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shisa4Q8CA71 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shisa4Q8CA71 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Shisa4Q8CA71 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.59■■□□□ 1.05
Shisa4Q8CA71 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.59■■□□□ 1.05
Shisa4Q8CA71 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Shisa4Q8CA71 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.59■■□□□ 1.05
Shisa4Q8CA71 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Shisa4Q8CA71 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shisa4Q8CA71 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shisa4Q8CA71 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Shisa4Q8CA71 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Shisa4Q8CA71 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Shisa4Q8CA71 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.57■■□□□ 1.04
Shisa4Q8CA71 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shisa4Q8CA71 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.57■■□□□ 1.04
Shisa4Q8CA71 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
Shisa4Q8CA71 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.57■■□□□ 1.04
Shisa4Q8CA71 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shisa4Q8CA71 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shisa4Q8CA71 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Shisa4Q8CA71 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shisa4Q8CA71 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.56■■□□□ 1.04
Shisa4Q8CA71 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shisa4Q8CA71 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Shisa4Q8CA71 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shisa4Q8CA71 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.55■■□□□ 1.04
Shisa4Q8CA71 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shisa4Q8CA71 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.55■■□□□ 1.04
Shisa4Q8CA71 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shisa4Q8CA71 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.55■■□□□ 1.04
Shisa4Q8CA71 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.55■■□□□ 1.04
Shisa4Q8CA71 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shisa4Q8CA71 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Gm7977-201ENSMUST00000193787 748 ntBASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Gm44549-201ENSMUST00000208351 577 ntBASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shisa4Q8CA71 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Gm20049-201ENSMUST00000219950 730 ntBASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Shisa4Q8CA71 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Shisa4Q8CA71 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms