Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap54Q8C6S9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap54Q8C6S9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.85■□□□□ 0.45
Cfap54Q8C6S9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap54Q8C6S9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cfap54Q8C6S9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Gm3375-201ENSMUST00000203929 796 ntBASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap54Q8C6S9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap54Q8C6S9 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.83■□□□□ 0.45
Cfap54Q8C6S9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap54Q8C6S9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.83■□□□□ 0.45
Cfap54Q8C6S9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap54Q8C6S9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap54Q8C6S9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap54Q8C6S9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 Iqck-206ENSMUST00000208658 2891 ntBASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.83■□□□□ 0.44
Cfap54Q8C6S9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.82■□□□□ 0.44
Cfap54Q8C6S9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Gm10013-201ENSMUST00000106074 672 ntBASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap54Q8C6S9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cfap54Q8C6S9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap54Q8C6S9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap54Q8C6S9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms