Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Eri3Q8C460 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Eri3Q8C460 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.56■□□□□ 0.4
Eri3Q8C460 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.56■□□□□ 0.4
Eri3Q8C460 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.56■□□□□ 0.4
Eri3Q8C460 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Eri3Q8C460 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.55■□□□□ 0.4
Eri3Q8C460 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.55■□□□□ 0.4
Eri3Q8C460 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Eri3Q8C460 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
Eri3Q8C460 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Eri3Q8C460 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.55■□□□□ 0.4
Eri3Q8C460 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.55■□□□□ 0.4
Eri3Q8C460 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Eri3Q8C460 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.54■□□□□ 0.4
Eri3Q8C460 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.54■□□□□ 0.4
Eri3Q8C460 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.54■□□□□ 0.4
Eri3Q8C460 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.54■□□□□ 0.4
Eri3Q8C460 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.54■□□□□ 0.4
Eri3Q8C460 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Eri3Q8C460 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Eri3Q8C460 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Eri3Q8C460 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.53■□□□□ 0.4
Eri3Q8C460 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Eri3Q8C460 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Eri3Q8C460 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Eri3Q8C460 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Eri3Q8C460 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.52■□□□□ 0.4
Eri3Q8C460 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Eri3Q8C460 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Eri3Q8C460 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Eri3Q8C460 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.52■□□□□ 0.4
Eri3Q8C460 Gm37179-201ENSMUST00000194862 823 ntBASIC17.52■□□□□ 0.4
Eri3Q8C460 Gm6365-201ENSMUST00000054711 744 ntBASIC17.52■□□□□ 0.4
Eri3Q8C460 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Eri3Q8C460 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Eri3Q8C460 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Eri3Q8C460 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Eri3Q8C460 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Eri3Q8C460 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Eri3Q8C460 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Eri3Q8C460 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Eri3Q8C460 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Eri3Q8C460 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Eri3Q8C460 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Eri3Q8C460 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Eri3Q8C460 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Eri3Q8C460 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.51■□□□□ 0.39
Eri3Q8C460 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.51■□□□□ 0.39
Eri3Q8C460 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.51■□□□□ 0.39
Eri3Q8C460 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.51■□□□□ 0.39
Eri3Q8C460 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Eri3Q8C460 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms