Protein–RNA interactions for Protein: Q8BYH3

Trmt13, tRNA:m(4)X modification enzyme TRM13 homolog, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt13Q8BYH3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trmt13Q8BYH3 Flg-201ENSMUST00000050758 1488 ntBASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trmt13Q8BYH3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Gm15565-201ENSMUST00000118890 427 ntBASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Gm13836-201ENSMUST00000121159 501 ntBASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trmt13Q8BYH3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Gm37055-201ENSMUST00000191866 133 ntBASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trmt13Q8BYH3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trmt13Q8BYH3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trmt13Q8BYH3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Trmt13Q8BYH3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Trmt13Q8BYH3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trmt13Q8BYH3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trmt13Q8BYH3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.24■□□□□ 0.83
Trmt13Q8BYH3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trmt13Q8BYH3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trmt13Q8BYH3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trmt13Q8BYH3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.24■□□□□ 0.83
Trmt13Q8BYH3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.24■□□□□ 0.83
Trmt13Q8BYH3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trmt13Q8BYH3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms