Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ptpn7Q8BUM3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptpn7Q8BUM3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ptpn7Q8BUM3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ptpn7Q8BUM3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ptpn7Q8BUM3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ptpn7Q8BUM3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.27■□□□□ 0.35
Ptpn7Q8BUM3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ptpn7Q8BUM3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Ptpn7Q8BUM3 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Gm43017-201ENSMUST00000198296 752 ntBASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ptpn7Q8BUM3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ptpn7Q8BUM3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ptpn7Q8BUM3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptpn7Q8BUM3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptpn7Q8BUM3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms