Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.88■□□□□ 0.61
Suds3Q8BR65 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.88■□□□□ 0.61
Suds3Q8BR65 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
Suds3Q8BR65 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Suds3Q8BR65 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Suds3Q8BR65 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Suds3Q8BR65 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.87■□□□□ 0.61
Suds3Q8BR65 Gm38205-201ENSMUST00000192243 258 ntBASIC18.87■□□□□ 0.61
Suds3Q8BR65 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Suds3Q8BR65 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.87■□□□□ 0.61
Suds3Q8BR65 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Suds3Q8BR65 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Suds3Q8BR65 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Suds3Q8BR65 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.86■□□□□ 0.61
Suds3Q8BR65 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.86■□□□□ 0.61
Suds3Q8BR65 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.86■□□□□ 0.61
Suds3Q8BR65 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Suds3Q8BR65 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.85■□□□□ 0.61
Suds3Q8BR65 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.85■□□□□ 0.61
Suds3Q8BR65 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Suds3Q8BR65 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.84■□□□□ 0.61
Suds3Q8BR65 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.84■□□□□ 0.61
Suds3Q8BR65 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Suds3Q8BR65 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.84■□□□□ 0.61
Suds3Q8BR65 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Suds3Q8BR65 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Suds3Q8BR65 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Suds3Q8BR65 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Suds3Q8BR65 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Suds3Q8BR65 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms