Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.96■□□□□ 0.14
Cdkl3Q8BLF2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdkl3Q8BLF2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Cdkl3Q8BLF2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdkl3Q8BLF2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdkl3Q8BLF2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 AA386476-201ENSMUST00000098781 1665 ntBASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Gm13238-201ENSMUST00000117655 780 ntBASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cdkl3Q8BLF2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdkl3Q8BLF2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdkl3Q8BLF2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdkl3Q8BLF2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdkl3Q8BLF2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdkl3Q8BLF2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdkl3Q8BLF2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms