Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Mir7075-201ENSMUST00000184187 82 ntBASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smndc1Q8BGT7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Smndc1Q8BGT7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smndc1Q8BGT7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smndc1Q8BGT7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smndc1Q8BGT7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smndc1Q8BGT7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smndc1Q8BGT7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smndc1Q8BGT7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Gm43530-201ENSMUST00000195920 274 ntBASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smndc1Q8BGT7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smndc1Q8BGT7 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smndc1Q8BGT7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smndc1Q8BGT7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms