Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Gm27405-201ENSMUST00000184201 112 ntBASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Gm10849-201ENSMUST00000100397 618 ntBASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.58■■□□□ 1.05
Samm50Q8BGH2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Samm50Q8BGH2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.04
Samm50Q8BGH2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Samm50Q8BGH2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.58■■□□□ 1.04
Samm50Q8BGH2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Samm50Q8BGH2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Samm50Q8BGH2 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.58■■□□□ 1.04
Samm50Q8BGH2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Samm50Q8BGH2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Samm50Q8BGH2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Samm50Q8BGH2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Samm50Q8BGH2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Samm50Q8BGH2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Gm38205-201ENSMUST00000192243 258 ntBASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Samm50Q8BGH2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms