Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubp1Q811S7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Ubp1Q811S7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ubp1Q811S7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubp1Q811S7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.15■□□□□ 0.5
Ubp1Q811S7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubp1Q811S7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.15■□□□□ 0.5
Ubp1Q811S7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ubp1Q811S7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ubp1Q811S7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.14■□□□□ 0.49
Ubp1Q811S7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Ubp1Q811S7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.13■□□□□ 0.49
Ubp1Q811S7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubp1Q811S7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubp1Q811S7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubp1Q811S7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ubp1Q811S7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.12■□□□□ 0.49
Ubp1Q811S7 Mir5133-201ENSMUST00000174955 77 ntBASIC18.12■□□□□ 0.49
Ubp1Q811S7 Gm29257-201ENSMUST00000186115 639 ntBASIC18.12■□□□□ 0.49
Ubp1Q811S7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubp1Q811S7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubp1Q811S7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms