Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Gm26474-201ENSMUST00000116762 122 ntBASIC18.2■□□□□ 0.5
Skida1Q80YR3 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Gm18944-201ENSMUST00000207672 643 ntBASIC18.2■□□□□ 0.5
Skida1Q80YR3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Skida1Q80YR3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.19■□□□□ 0.5
Skida1Q80YR3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.19■□□□□ 0.5
Skida1Q80YR3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.19■□□□□ 0.5
Skida1Q80YR3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.19■□□□□ 0.5
Skida1Q80YR3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Skida1Q80YR3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.18■□□□□ 0.5
Skida1Q80YR3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Gm10812-201ENSMUST00000099864 546 ntBASIC18.18■□□□□ 0.5
Skida1Q80YR3 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC18.18■□□□□ 0.5
Skida1Q80YR3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Skida1Q80YR3 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.17■□□□□ 0.5
Skida1Q80YR3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Gm13148-201ENSMUST00000118892 745 ntBASIC18.17■□□□□ 0.5
Skida1Q80YR3 Gm14301-201ENSMUST00000120181 324 ntBASIC18.17■□□□□ 0.5
Skida1Q80YR3 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Skida1Q80YR3 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.17■□□□□ 0.5
Skida1Q80YR3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Skida1Q80YR3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.16■□□□□ 0.5
Skida1Q80YR3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Gm43452-201ENSMUST00000201873 991 ntBASIC18.16■□□□□ 0.5
Skida1Q80YR3 Gm44270-201ENSMUST00000203084 1234 ntBASIC18.16■□□□□ 0.5
Skida1Q80YR3 Gm44683-201ENSMUST00000209088 484 ntBASIC18.16■□□□□ 0.5
Skida1Q80YR3 CT010480.1-201ENSMUST00000223612 363 ntBASIC18.16■□□□□ 0.5
Skida1Q80YR3 Gm25131-201ENSMUST00000082653 151 ntBASIC18.16■□□□□ 0.5
Skida1Q80YR3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Skida1Q80YR3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.15■□□□□ 0.5
Skida1Q80YR3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms