Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim62Q80V85 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trim62Q80V85 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.12■□□□□ 0.65
Trim62Q80V85 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trim62Q80V85 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim62Q80V85 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim62Q80V85 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.11■□□□□ 0.65
Trim62Q80V85 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.11■□□□□ 0.65
Trim62Q80V85 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.11■□□□□ 0.65
Trim62Q80V85 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.11■□□□□ 0.65
Trim62Q80V85 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.11■□□□□ 0.65
Trim62Q80V85 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim62Q80V85 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim62Q80V85 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim62Q80V85 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim62Q80V85 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Trim62Q80V85 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim62Q80V85 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim62Q80V85 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim62Q80V85 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.1■□□□□ 0.65
Trim62Q80V85 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim62Q80V85 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.09■□□□□ 0.65
Trim62Q80V85 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trim62Q80V85 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trim62Q80V85 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim62Q80V85 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.09■□□□□ 0.65
Trim62Q80V85 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim62Q80V85 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.09■□□□□ 0.65
Trim62Q80V85 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim62Q80V85 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Trim62Q80V85 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim62Q80V85 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim62Q80V85 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim62Q80V85 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim62Q80V85 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim62Q80V85 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim62Q80V85 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim62Q80V85 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.08■□□□□ 0.64
Trim62Q80V85 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim62Q80V85 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim62Q80V85 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim62Q80V85 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim62Q80V85 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim62Q80V85 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.07■□□□□ 0.64
Trim62Q80V85 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.07■□□□□ 0.64
Trim62Q80V85 Gm4968-201ENSMUST00000071458 858 ntBASIC19.07■□□□□ 0.64
Trim62Q80V85 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim62Q80V85 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim62Q80V85 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim62Q80V85 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim62Q80V85 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim62Q80V85 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim62Q80V85 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim62Q80V85 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim62Q80V85 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.06■□□□□ 0.64
Trim62Q80V85 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim62Q80V85 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim62Q80V85 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim62Q80V85 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim62Q80V85 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Trim62Q80V85 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim62Q80V85 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim62Q80V85 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim62Q80V85 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim62Q80V85 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms