Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Rpp38Q80UU2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rpp38Q80UU2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rpp38Q80UU2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rpp38Q80UU2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.45■□□□□ 0.54
Rpp38Q80UU2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Rpp38Q80UU2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpp38Q80UU2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Gm37179-201ENSMUST00000194862 823 ntBASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpp38Q80UU2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpp38Q80UU2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp38Q80UU2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp38Q80UU2 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.41■□□□□ 0.54
Rpp38Q80UU2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.41■□□□□ 0.54
Rpp38Q80UU2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp38Q80UU2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms