Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.18■□□□□ 0.82
Ush1gQ80T11 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.18■□□□□ 0.82
Ush1gQ80T11 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ush1gQ80T11 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Gm44549-201ENSMUST00000208351 577 ntBASIC20.17■□□□□ 0.82
Ush1gQ80T11 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ush1gQ80T11 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ush1gQ80T11 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ush1gQ80T11 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ush1gQ80T11 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ush1gQ80T11 Gm715-201ENSMUST00000117865 831 ntBASIC20.16■□□□□ 0.82
Ush1gQ80T11 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ush1gQ80T11 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ush1gQ80T11 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ush1gQ80T11 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ush1gQ80T11 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ush1gQ80T11 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ush1gQ80T11 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ush1gQ80T11 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ush1gQ80T11 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.14■□□□□ 0.81
Ush1gQ80T11 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ush1gQ80T11 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ush1gQ80T11 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ush1gQ80T11 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.14■□□□□ 0.81
Ush1gQ80T11 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.14■□□□□ 0.81
Ush1gQ80T11 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ush1gQ80T11 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ush1gQ80T11 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ush1gQ80T11 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ush1gQ80T11 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.13■□□□□ 0.81
Ush1gQ80T11 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ush1gQ80T11 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ush1gQ80T11 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ush1gQ80T11 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ush1gQ80T11 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ush1gQ80T11 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.12■□□□□ 0.81
Ush1gQ80T11 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.12■□□□□ 0.81
Ush1gQ80T11 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms