Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Exosc3Q7TQK4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Exosc3Q7TQK4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.97■□□□□ 0.31
Exosc3Q7TQK4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Gm13148-201ENSMUST00000118892 745 ntBASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Exosc3Q7TQK4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Exosc3Q7TQK4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.96■□□□□ 0.3
Exosc3Q7TQK4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Exosc3Q7TQK4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Exosc3Q7TQK4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.96■□□□□ 0.3
Exosc3Q7TQK4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Exosc3Q7TQK4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Exosc3Q7TQK4 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.96■□□□□ 0.3
Exosc3Q7TQK4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Exosc3Q7TQK4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.94■□□□□ 0.3
Exosc3Q7TQK4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms