Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otub1Q7TQI3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otub1Q7TQI3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otub1Q7TQI3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otub1Q7TQI3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Otub1Q7TQI3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otub1Q7TQI3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Otub1Q7TQI3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.52■□□□□ 0.4
Otub1Q7TQI3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.52■□□□□ 0.4
Otub1Q7TQI3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otub1Q7TQI3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Otub1Q7TQI3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Otub1Q7TQI3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Otub1Q7TQI3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Otub1Q7TQI3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Otub1Q7TQI3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Gm9988-201ENSMUST00000069786 435 ntBASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otub1Q7TQI3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Otub1Q7TQI3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Otub1Q7TQI3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Otub1Q7TQI3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Otub1Q7TQI3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Otub1Q7TQI3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms