Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rnf139Q7TMV1 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf139Q7TMV1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Rnf139Q7TMV1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Rnf139Q7TMV1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf139Q7TMV1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf139Q7TMV1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf139Q7TMV1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf139Q7TMV1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf139Q7TMV1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf139Q7TMV1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf139Q7TMV1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf139Q7TMV1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf139Q7TMV1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf139Q7TMV1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf139Q7TMV1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf139Q7TMV1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms