Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.69■□□□□ 0.74
CtifQ6PEE2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.69■□□□□ 0.74
CtifQ6PEE2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtifQ6PEE2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtifQ6PEE2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CtifQ6PEE2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtifQ6PEE2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtifQ6PEE2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtifQ6PEE2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CtifQ6PEE2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CtifQ6PEE2 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.68■□□□□ 0.74
CtifQ6PEE2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CtifQ6PEE2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtifQ6PEE2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtifQ6PEE2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtifQ6PEE2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtifQ6PEE2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.67■□□□□ 0.74
CtifQ6PEE2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Gm10420-201ENSMUST00000121713 882 ntBASIC19.67■□□□□ 0.74
CtifQ6PEE2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Serp2-204ENSMUST00000228055 705 ntBASIC19.67■□□□□ 0.74
CtifQ6PEE2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.67■□□□□ 0.74
CtifQ6PEE2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtifQ6PEE2 Dancr-204ENSMUST00000132389 2347 ntBASIC19.67■□□□□ 0.74
CtifQ6PEE2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.66■□□□□ 0.74
CtifQ6PEE2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CtifQ6PEE2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CtifQ6PEE2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CtifQ6PEE2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.64■□□□□ 0.73
CtifQ6PEE2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CtifQ6PEE2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.64■□□□□ 0.73
CtifQ6PEE2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CtifQ6PEE2 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.63■□□□□ 0.73
CtifQ6PEE2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CtifQ6PEE2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CtifQ6PEE2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CtifQ6PEE2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CtifQ6PEE2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.63■□□□□ 0.73
CtifQ6PEE2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CtifQ6PEE2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CtifQ6PEE2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CtifQ6PEE2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CtifQ6PEE2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.62■□□□□ 0.73
CtifQ6PEE2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CtifQ6PEE2 Etf1-202ENSMUST00000180351 108 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms