Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Gm3375-201ENSMUST00000203929 796 ntBASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Gm42545-201ENSMUST00000202755 922 ntBASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Gm21814-202ENSMUST00000203277 873 ntBASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC24.36■■□□□ 1.49
Chd4Q6PDQ2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chd4Q6PDQ2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC24.36■■□□□ 1.49
Chd4Q6PDQ2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC24.36■■□□□ 1.49
Chd4Q6PDQ2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chd4Q6PDQ2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Chd4Q6PDQ2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chd4Q6PDQ2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Chd4Q6PDQ2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Arhgef4-208ENSMUST00000211073 171 ntBASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chd4Q6PDQ2 Gm8668-201ENSMUST00000120559 1447 ntBASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Gm11643-201ENSMUST00000119578 864 ntBASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Gm10138-203ENSMUST00000206952 366 ntBASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Chd4Q6PDQ2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Gm43183-201ENSMUST00000200632 547 ntBASIC24.33■■□□□ 1.49
Chd4Q6PDQ2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Chd4Q6PDQ2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Chd4Q6PDQ2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC24.32■■□□□ 1.48
Chd4Q6PDQ2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chd4Q6PDQ2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chd4Q6PDQ2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chd4Q6PDQ2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chd4Q6PDQ2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC24.32■■□□□ 1.48
Chd4Q6PDQ2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chd4Q6PDQ2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chd4Q6PDQ2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Chd4Q6PDQ2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Chd4Q6PDQ2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Chd4Q6PDQ2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Chd4Q6PDQ2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Chd4Q6PDQ2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Chd4Q6PDQ2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Chd4Q6PDQ2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Gm9987-201ENSMUST00000069768 567 ntBASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chd4Q6PDQ2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Mir6349-201ENSMUST00000184059 97 ntBASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
Chd4Q6PDQ2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC24.27■■□□□ 1.48
Chd4Q6PDQ2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC24.27■■□□□ 1.48
Chd4Q6PDQ2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chd4Q6PDQ2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chd4Q6PDQ2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chd4Q6PDQ2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Chd4Q6PDQ2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms