Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ShbQ6PD21 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ShbQ6PD21 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.18■□□□□ 0.82
ShbQ6PD21 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.18■□□□□ 0.82
ShbQ6PD21 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.18■□□□□ 0.82
ShbQ6PD21 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ShbQ6PD21 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ShbQ6PD21 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShbQ6PD21 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.17■□□□□ 0.82
ShbQ6PD21 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.17■□□□□ 0.82
ShbQ6PD21 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.17■□□□□ 0.82
ShbQ6PD21 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShbQ6PD21 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ShbQ6PD21 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShbQ6PD21 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShbQ6PD21 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.16■□□□□ 0.82
ShbQ6PD21 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.16■□□□□ 0.82
ShbQ6PD21 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ShbQ6PD21 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.15■□□□□ 0.82
ShbQ6PD21 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.15■□□□□ 0.82
ShbQ6PD21 Gm7284-201ENSMUST00000131667 944 ntBASIC20.15■□□□□ 0.82
ShbQ6PD21 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.15■□□□□ 0.82
ShbQ6PD21 Gm22697-201ENSMUST00000175194 63 ntBASIC20.15■□□□□ 0.82
ShbQ6PD21 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.15■□□□□ 0.82
ShbQ6PD21 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ShbQ6PD21 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.15■□□□□ 0.82
ShbQ6PD21 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShbQ6PD21 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ShbQ6PD21 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ShbQ6PD21 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShbQ6PD21 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShbQ6PD21 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShbQ6PD21 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.14■□□□□ 0.81
ShbQ6PD21 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.14■□□□□ 0.81
ShbQ6PD21 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShbQ6PD21 Gm12085-201ENSMUST00000119263 940 ntBASIC20.14■□□□□ 0.81
ShbQ6PD21 Gm2274-201ENSMUST00000184539 609 ntBASIC20.14■□□□□ 0.81
ShbQ6PD21 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
ShbQ6PD21 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ShbQ6PD21 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ShbQ6PD21 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ShbQ6PD21 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShbQ6PD21 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShbQ6PD21 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShbQ6PD21 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShbQ6PD21 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ShbQ6PD21 Gm25016-201ENSMUST00000158399 131 ntBASIC20.13■□□□□ 0.81
ShbQ6PD21 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ShbQ6PD21 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShbQ6PD21 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShbQ6PD21 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ShbQ6PD21 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShbQ6PD21 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ShbQ6PD21 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShbQ6PD21 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ShbQ6PD21 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShbQ6PD21 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShbQ6PD21 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShbQ6PD21 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ShbQ6PD21 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.12■□□□□ 0.81
ShbQ6PD21 Gm7461-201ENSMUST00000058918 827 ntBASIC20.12■□□□□ 0.81
ShbQ6PD21 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.12■□□□□ 0.81
ShbQ6PD21 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ShbQ6PD21 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShbQ6PD21 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ShbQ6PD21 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.11■□□□□ 0.81
ShbQ6PD21 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShbQ6PD21 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.11■□□□□ 0.81
ShbQ6PD21 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.11■□□□□ 0.81
ShbQ6PD21 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ShbQ6PD21 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShbQ6PD21 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ShbQ6PD21 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ShbQ6PD21 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms